Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | ASC92_07705 | Not Available | Positive | 2748532 - 2749302 | 28435.9 |
| abc transporter substrate-binding protein | ASC92_07710 | Not Available | Positive | 2749345 - 2750337 | 34383.7 |
| 2-hydroxymuconic semialdehyde dehydrogenase | ASC92_07715 | Not Available | Positive | 2750358 - 2751821 | 52491.8 |
| aromatic ring-opening dioxygenase liga | ASC92_07720 | Not Available | Positive | 2752169 - 2752504 | 12295.7 |
| extradiol ring-cleavage dioxygenase | ASC92_07725 | Not Available | Positive | 2752501 - 2753328 | 30075.9 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | ASC92_07730 | Not Available | Positive | 2753342 - 2753749 | 14791.7 |
| 2-oxo-hepta-3-ene-1,7-dioate hydratase | ASC92_07735 | Not Available | Positive | 2753760 - 2754563 | 29275.0 |
| 2-dehydro-3-deoxyglucarate aldolase | ASC92_07740 | Not Available | Positive | 2754567 - 2755388 | 28767.5 |
| polyketide cyclase | ASC92_07745 | Not Available | Positive | 2755414 - 2755884 | 17044.3 |
| dihydroxy-acid dehydratase | ASC92_07750 | Not Available | Positive | 2755889 - 2757622 | 60520.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
