Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase | ASC92_07605 | Not Available | Negative | 2728838 - 2729527 | 24640.8 |
| abc transporter permease | ASC92_07610 | Not Available | Negative | 2729533 - 2730456 | 31122.4 |
| abc transporter permease | ASC92_07615 | Not Available | Negative | 2730453 - 2731514 | 36396.4 |
| abc transporter substrate-binding protein | ASC92_07620 | Not Available | Negative | 2731542 - 2732666 | 39903.1 |
| hypothetical protein | ASC92_07625 | Not Available | Negative | 2732716 - 2733096 | 14101.7 |
| allophanate hydrolase | ASC92_07630 | Not Available | Negative | 2733110 - 2734813 | 58654.3 |
| peptidase m48 | ASC92_07635 | Not Available | Negative | 2735031 - 2735885 | 30331.6 |
| ampg family muropeptide mfs transporter | ASC92_07640 | Not Available | Positive | 2735946 - 2737331 | 49496.3 |
| 3-oxoacyl-acp synthase | ASC92_07645 | Not Available | Positive | 2737469 - 2738677 | 42058.9 |
| hypothetical protein | ASC92_07650 | Not Available | Positive | 2738674 - 2739531 | 29344.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
