Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_07505 | Not Available | Positive | 2708329 - 2708550 | 7498.42 |
| iclr family transcriptional regulator | ASC92_07510 | Not Available | Negative | 2708555 - 2709400 | 29710.6 |
| mbl fold metallo-hydrolase | ASC92_07515 | Not Available | Positive | 2709544 - 2710503 | 35190.7 |
| fad-dependent oxidoreductase | ASC92_07520 | Not Available | Positive | 2710654 - 2712291 | 60149.2 |
| hypothetical protein | ASC92_07525 | Not Available | Positive | 2712300 - 2712482 | 6492.72 |
| homogentisate 1,2-dioxygenase | ASC92_07530 | Not Available | Positive | 2712543 - 2713829 | 47327.1 |
| fumarylacetoacetase | ASC92_07535 | Not Available | Positive | 2713870 - 2715135 | 45390.8 |
| penicillin-binding protein 2 | ASC92_07540 | Not Available | Negative | 2715268 - 2717238 | 71545.6 |
| rod shape-determining protein mred | ASC92_07545 | Not Available | Negative | 2717291 - 2717812 | 19007.0 |
| rod shape-determining protein mrec | ASC92_07550 | Not Available | Negative | 2717809 - 2718765 | 33995.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
