Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycerophosphodiester phosphodiesterase | ASC92_07305 | Not Available | Negative | 2663604 - 2664791 | 42884.8 |
| acetylornithine deacetylase | ASC92_07310 | Not Available | Positive | 2664894 - 2666060 | 42112.1 |
| hypothetical protein | ASC92_07315 | Not Available | Positive | 2666326 - 2667549 | 44675.0 |
| hypothetical protein | ASC92_07320 | Not Available | Positive | 2667668 - 2669329 | 58606.5 |
| histidine kinase | ASC92_07325 | Not Available | Positive | 2669465 - 2670238 | 26441.4 |
| acetyl-coa carboxylase carboxyltransferase subunit | ASC92_07330 | Not Available | Positive | 2670322 - 2671932 | 57216.7 |
| 3-methylcrotonyl-coa carboxylase | ASC92_07335 | Not Available | Positive | 2671929 - 2673878 | 68925.5 |
| 2,4-dienoyl-coa reductase | ASC92_07340 | Not Available | Positive | 2673910 - 2674824 | 31730.8 |
| acyl-coa dehydrogenase | ASC92_07345 | Not Available | Positive | 2674840 - 2676000 | 42528.3 |
| acyl-coa dehydrogenase | ASC92_07350 | Not Available | Positive | 2676008 - 2677171 | 41410.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
