Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pilus assembly protein pilm | ASC92_01165 | Not Available | Positive | 270441 - 271520 | 39018.7 |
| fimbrial protein | ASC92_01170 | Not Available | Positive | 271517 - 272137 | 22876.7 |
| pilus assembly protein pilo | ASC92_01175 | Not Available | Positive | 272144 - 272821 | 25068.2 |
| pilus assembly protein pilp | ASC92_01180 | Not Available | Positive | 272818 - 273357 | 19990.1 |
| secretin | ASC92_01185 | Not Available | Positive | 273354 - 275504 | 76090.0 |
| shikimate kinase | ASC92_01190 | Not Available | Positive | 275528 - 276076 | 20170.3 |
| 3-dehydroquinate synthase | ASC92_01195 | Not Available | Positive | 276118 - 277224 | 39085.5 |
| deoxyguanosinetriphosphate triphosphohydrolase | ASC92_01200 | Not Available | Positive | 277221 - 278351 | 42547.3 |
| mfs transporter | ASC92_01205 | Not Available | Positive | 278348 - 279601 | 42454.2 |
| peptidase | ASC92_01210 | Not Available | Positive | 279598 - 280200 | 21800.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
