Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_07205 | Not Available | Negative | 2643728 - 2645080 | 47695.8 |
| receptor | ASC92_07210 | Not Available | Negative | 2645080 - 2646057 | 34129.8 |
| tctc | ASC92_07215 | Not Available | Negative | 2646143 - 2647120 | 34654.6 |
| salicylate hydroxylase | ASC92_07220 | Not Available | Negative | 2647180 - 2648427 | 44958.8 |
| fumarylacetoacetate hydrolase | ASC92_07225 | Not Available | Negative | 2648452 - 2649156 | 25412.4 |
| gentisate 1,2-dioxygenase | ASC92_07230 | Not Available | Negative | 2649225 - 2650286 | 38805.1 |
| lysr family transcriptional regulator | ASC92_07235 | Not Available | Positive | 2650408 - 2651304 | 33082.0 |
| acyl-coa thioesterase | ASC92_07240 | Not Available | Positive | 2651404 - 2651853 | 15924.3 |
| poly(hydroxyalkanoate) granule-associated protein | ASC92_07245 | Not Available | Positive | 2651947 - 2652423 | 16702.9 |
| tetr family transcriptional regulator | ASC92_07250 | Not Available | Positive | 2652568 - 2653293 | 27224.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
