Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | ASC92_07105 | Not Available | Negative | 2613590 - 2616910 | 121214.0 |
| single-stranded dna-binding protein | ASC92_07110 | Not Available | Negative | 2617149 - 2617700 | 19297.3 |
| chloride channel protein | ASC92_07115 | Not Available | Positive | 2617809 - 2619167 | 46898.9 |
| abc-atpase uvra | ASC92_07120 | Not Available | Positive | 2619217 - 2622309 | 113370.0 |
| hypothetical protein | ASC92_07125 | Not Available | Negative | 2622343 - 2622822 | 17552.1 |
| hypothetical protein | ASC92_07130 | Not Available | Negative | 2622819 - 2623589 | 28942.2 |
| hypothetical protein | ASC92_07135 | Not Available | Positive | 2623691 - 2624581 | 32273.6 |
| gntr family transcriptional regulator | ASC92_07140 | Not Available | Negative | 2624599 - 2625354 | 28201.9 |
| fad-dependent oxidoreductase | ASC92_07145 | Not Available | Negative | 2625672 - 2627435 | 63109.9 |
| carbohydrate kinase | ASC92_07150 | Not Available | Negative | 2627432 - 2628928 | 50947.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
