Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glyoxylate/hydroxypyruvate reductase a | ASC92_07050 | Not Available | Negative | 2598480 - 2599415 | 33797.8 |
| gcn5 family acetyltransferase | ASC92_07055 | Not Available | Negative | 2599656 - 2600531 | 31054.3 |
| fad-dependent oxidoreductase | ASC92_07060 | Not Available | Positive | 2601132 - 2602424 | 46520.4 |
| abc transporter substrate-binding protein | ASC92_07065 | Not Available | Positive | 2602490 - 2604112 | 58570.4 |
| abc transporter permease | ASC92_07070 | Not Available | Positive | 2604135 - 2605091 | 33876.7 |
| dna-directed rna polymerase subunit alpha | ASC92_07075 | Not Available | Positive | 2605102 - 2606010 | 31315.8 |
| abc transporter | ASC92_07080 | Not Available | Positive | 2606010 - 2607635 | 58616.3 |
| tartrate dehydrogenase | ASC92_07085 | Not Available | Positive | 2607647 - 2608735 | 39596.2 |
| nad-dependent succinate-semialdehyde dehydrogenase | ASC92_07090 | Not Available | Positive | 2608753 - 2610243 | 52817.9 |
| hypothetical protein | ASC92_07095 | Not Available | Negative | 2610254 - 2612503 | 79736.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
