Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadp transhydrogenase subunit alpha | ASC92_06945 | Not Available | Negative | 2578605 - 2579747 | 39032.5 |
| two-component system response regulator | ASC92_06950 | Not Available | Positive | 2580187 - 2580900 | 26981.7 |
| hypothetical protein | ASC92_06955 | Not Available | Positive | 2581001 - 2581435 | 15917.0 |
| nudix hydrolase | ASC92_06960 | Not Available | Positive | 2581449 - 2581940 | 17863.1 |
| pp_02334 | ASC92_06965 | Not Available | Negative | 2581942 - 2583048 | Not Available |
| dicarboxylate--coa ligase pima | ASC92_06970 | Not Available | Positive | 2583235 - 2584965 | 62676.8 |
| alkane 1-monooxygenase | ASC92_06975 | Not Available | Negative | 2584979 - 2585971 | 35758.8 |
| hypothetical protein | ASC92_06980 | Not Available | Negative | 2586044 - 2586649 | 22491.3 |
| hypothetical protein | ASC92_06985 | Not Available | Positive | 2586869 - 2587591 | 26857.2 |
| helicase snf2 | ASC92_06990 | Not Available | Negative | 2587670 - 2588050 | 12140.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
