Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| biopolymer transporter exbd | ASC92_06845 | Not Available | Negative | 2558678 - 2559151 | 16263.6 |
| flagellar motor protein mota | ASC92_06850 | Not Available | Negative | 2559167 - 2559862 | 23782.2 |
| 4-hydroxy-tetrahydrodipicolinate reductase | ASC92_06855 | Not Available | Negative | 2559878 - 2560642 | 26727.2 |
| cell envelope protein smpa | ASC92_06860 | Not Available | Negative | 2560832 - 2561395 | 20506.5 |
| fur family transcriptional regulator | ASC92_06865 | Not Available | Positive | 2561486 - 2561905 | 15925.0 |
| serine kinase | ASC92_06870 | Not Available | Negative | 2562011 - 2562970 | 35504.2 |
| pts sugar transporter subunit iia | ASC92_06875 | Not Available | Negative | 2563115 - 2563582 | 16468.0 |
| ribosome hibernation promoting factor | ASC92_06880 | Not Available | Negative | 2563768 - 2564097 | 12701.2 |
| atp-dependent dna helicase | ASC92_06885 | Not Available | Negative | 2564423 - 2566543 | 77700.1 |
| magnesium transporter cora | ASC92_06890 | Not Available | Positive | 2566769 - 2567755 | 37972.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
