Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad/nadp octopine/nopaline dehydrogenase | ASC92_06795 | Not Available | Positive | 2542455 - 2543537 | 37863.2 |
| alkylhydroperoxidase | ASC92_06800 | Not Available | Negative | 2543532 - 2544128 | 21664.0 |
| hypothetical protein | ASC92_06805 | Not Available | Negative | 2544125 - 2544631 | 17461.1 |
| fad-dependent oxidoreductase | ASC92_06810 | Not Available | Negative | 2544628 - 2546085 | 52731.5 |
| alpha-glucosidase | ASC92_06815 | Not Available | Positive | 2546179 - 2547843 | 61702.6 |
| glycogen branching protein | ASC92_06820 | Not Available | Positive | 2547849 - 2550026 | 81515.5 |
| glycogen debranching protein | ASC92_06825 | Not Available | Positive | 2550646 - 2552700 | 74550.8 |
| glucose-1-phosphate adenylyltransferase | ASC92_06830 | Not Available | Positive | 2552788 - 2554095 | 48342.0 |
| glycogen synthase | ASC92_06835 | Not Available | Positive | 2554247 - 2555719 | 52738.0 |
| maltodextrin phosphorylase | ASC92_06840 | Not Available | Positive | 2556054 - 2558537 | 92942.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
