Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtp-binding protein | ASC92_01115 | Not Available | Negative | 258919 - 259662 | 26884.5 |
| cytochrome c | ASC92_01120 | Not Available | Positive | 259735 - 260409 | 23553.0 |
| cytochrome c biogenesis protein resb | ASC92_01125 | Not Available | Positive | 260529 - 262709 | 79164.7 |
| cytochrome c assembly protein | ASC92_01130 | Not Available | Positive | 262706 - 264022 | 49225.4 |
| sulfoxide reductase catalytic subunit yedy | ASC92_01135 | Not Available | Positive | 264139 - 265158 | 37716.2 |
| sulfite oxidase | ASC92_01140 | Not Available | Positive | 265187 - 265846 | 24685.0 |
| diaminopimelate decarboxylase | ASC92_01145 | Not Available | Negative | 265864 - 267150 | 45748.9 |
| hypothetical protein | ASC92_01150 | Not Available | Positive | 267151 - 267438 | 9797.95 |
| iron donor protein cyay | ASC92_01155 | Not Available | Positive | 267438 - 267770 | 12124.1 |
| penicillin-binding protein | ASC92_01160 | Not Available | Negative | 267787 - 270201 | 87692.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
