Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sporulation protein | ASC92_06645 | Not Available | Negative | 2509530 - 2510279 | 25622.4 |
| arginine--trna ligase | ASC92_06650 | Not Available | Negative | 2510291 - 2511976 | 61440.9 |
| hypothetical protein | ASC92_06655 | Not Available | Positive | 2512108 - 2512443 | 10645.9 |
| hypothetical protein | ASC92_06660 | Not Available | Negative | 2512522 - 2512974 | 16770.4 |
| lysr family transcriptional regulator | ASC92_06665 | Not Available | Negative | 2513066 - 2513992 | 33607.3 |
| coa-transferase | ASC92_06670 | Not Available | Negative | 2514025 - 2515215 | 42962.1 |
| 3-hydroxy-3-methylglutaryl-coa lyase | ASC92_06675 | Not Available | Negative | 2515208 - 2516143 | 32590.6 |
| iclr family transcriptional regulator | ASC92_06680 | Not Available | Positive | 2516241 - 2516981 | 26684.8 |
| malate synthase g | ASC92_06685 | Not Available | Positive | 2517111 - 2519285 | 77970.4 |
| mfs transporter | ASC92_06690 | Not Available | Positive | 2519409 - 2520680 | 44393.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
