Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_06545 | Not Available | Negative | 2491347 - 2492057 | 25567.8 |
| mfs transporter | ASC92_06550 | Not Available | Negative | 2492185 - 2493633 | 48858.6 |
| phosphatidylglycerophosphatase | ASC92_06555 | Not Available | Positive | 2493741 - 2494334 | 21454.1 |
| damage-inducible protein cina | ASC92_06560 | Not Available | Positive | 2494328 - 2494870 | 18502.9 |
| ketosteroid isomerase | ASC92_06565 | Not Available | Positive | 2494900 - 2495394 | 18260.5 |
| acetyltransferase | ASC92_06570 | Not Available | Positive | 2495391 - 2495708 | 11767.0 |
| zinc chelation protein secc | ASC92_06575 | Not Available | Negative | 2495986 - 2496777 | 29519.3 |
| glutamate synthase | ASC92_06580 | Not Available | Positive | 2496833 - 2498530 | 60922.4 |
| hypothetical protein | ASC92_06585 | Not Available | Positive | 2498527 - 2499444 | 32975.7 |
| twitching motility protein pilt | ASC92_06590 | Not Available | Negative | 2499441 - 2499869 | 15390.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
