Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fkbm family methyltransferase | ASC92_06445 | Not Available | Positive | 2462443 - 2463312 | 31777.5 |
| arac family transcriptional regulator | ASC92_06450 | Not Available | Negative | 2463339 - 2464316 | 35414.4 |
| isochorismatase | ASC92_06455 | Not Available | Positive | 2464417 - 2465049 | 22782.9 |
| hemagglutinin | ASC92_06460 | Not Available | Negative | 2465060 - 2470429 | 175024.0 |
| peptide abc transporter permease | ASC92_06465 | Not Available | Negative | 2470432 - 2472138 | 61080.3 |
| hypothetical protein | ASC92_06470 | Not Available | Negative | 2472424 - 2474595 | 77966.0 |
| hydroperoxidase | ASC92_06475 | Not Available | Negative | 2474738 - 2476933 | 80378.4 |
| transglutaminase | ASC92_06480 | Not Available | Positive | 2477344 - 2478159 | 30050.8 |
| atp-dependent dna ligase | ASC92_06485 | Not Available | Negative | 2478302 - 2480842 | 93330.7 |
| dna-binding protein | ASC92_06490 | Not Available | Negative | 2480858 - 2481811 | 35235.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
