Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_06395 | Not Available | Negative | 2450516 - 2451847 | 47510.9 |
| type vi secretion protein | ASC92_06400 | Not Available | Negative | 2451878 - 2453209 | 49146.3 |
| hypothetical protein | ASC92_06405 | Not Available | Negative | 2453367 - 2453672 | 10975.0 |
| hypothetical protein | ASC92_06410 | Not Available | Negative | 2453669 - 2454157 | 17856.3 |
| phosphonate abc transporter substrate-binding protein | ASC92_06415 | Not Available | Negative | 2454322 - 2455365 | 38331.2 |
| phosphonate abc transporter substrate-binding protein | ASC92_06420 | Not Available | Negative | 2455362 - 2456396 | 37965.6 |
| histidine kinase | ASC92_06425 | Not Available | Positive | 2456557 - 2458446 | 68134.2 |
| abc transporter substrate-binding protein | ASC92_06430 | Not Available | Positive | 2458682 - 2459644 | 32918.5 |
| histidine kinase | ASC92_06435 | Not Available | Positive | 2459641 - 2461629 | 69891.2 |
| hypothetical protein | ASC92_06440 | Not Available | Positive | 2461649 - 2462446 | 29217.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
