Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system lysozyme | ASC92_06345 | Not Available | Negative | 2436046 - 2436561 | 19409.4 |
| virulence protein scie type | ASC92_06350 | Not Available | Negative | 2436554 - 2437372 | 29962.7 |
| arac family transcriptional regulator | ASC92_06355 | Not Available | Negative | 2437401 - 2437958 | 20135.7 |
| peptidase c14 | ASC92_06360 | Not Available | Negative | 2438013 - 2439986 | 70543.4 |
| hypothetical protein | ASC92_06365 | Not Available | Negative | 2440142 - 2441308 | 40964.5 |
| hypothetical protein | ASC92_06370 | Not Available | Negative | 2441336 - 2442085 | 27022.3 |
| hypothetical protein | ASC92_06375 | Not Available | Negative | 2442117 - 2443718 | 56090.2 |
| serine/threonine protein kinase | ASC92_06380 | Not Available | Negative | 2443774 - 2445675 | 66791.7 |
| type vi secretion protein | ASC92_06385 | Not Available | Negative | 2446264 - 2446920 | 23811.2 |
| type vi secretion protein | ASC92_06390 | Not Available | Negative | 2446917 - 2450519 | 132797.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
