Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_06295 | Not Available | Negative | 2419383 - 2419877 | 17135.7 |
| type vi secretion protein vgr | ASC92_06300 | Not Available | Negative | 2419909 - 2422290 | 87330.8 |
| type vi secretion protein | ASC92_06305 | Not Available | Negative | 2422350 - 2422745 | 13501.8 |
| hypothetical protein | ASC92_06310 | Not Available | Negative | 2422755 - 2423381 | 22538.8 |
| hypothetical protein | ASC92_06315 | Not Available | Negative | 2423422 - 2424468 | 37728.3 |
| hypothetical protein | ASC92_06320 | Not Available | Negative | 2424471 - 2427107 | 94028.3 |
| type vi secretion protein vgr | ASC92_06325 | Not Available | Negative | 2427123 - 2429966 | 101405.0 |
| clpv1 family t6ss atpase | ASC92_06330 | Not Available | Negative | 2430308 - 2433088 | 100706.0 |
| type vi secretion protein | ASC92_06335 | Not Available | Negative | 2433085 - 2434170 | 41045.9 |
| type vi secretion system protein impg | ASC92_06340 | Not Available | Negative | 2434146 - 2436038 | 69317.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
