Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| evpb family type vi secretion protein | ASC92_06245 | Not Available | Positive | 2408224 - 2409717 | 55308.2 |
| type vi secretion protein | ASC92_06250 | Not Available | Positive | 2409870 - 2410349 | 16920.6 |
| hypothetical protein | ASC92_06255 | Not Available | Positive | 2410436 - 2410978 | 19776.6 |
| serine/threonine protein phosphatase | ASC92_06260 | Not Available | Negative | 2411078 - 2411869 | 28218.1 |
| hypothetical protein | ASC92_06265 | Not Available | Negative | 2411906 - 2413567 | 56862.7 |
| hypothetical protein | ASC92_06270 | Not Available | Negative | 2413833 - 2415125 | 46075.3 |
| hypothetical protein | ASC92_06275 | Not Available | Negative | 2415136 - 2415720 | 21369.0 |
| hypothetical protein | ASC92_06280 | Not Available | Negative | 2416048 - 2417193 | 40801.9 |
| 3-oxoacyl-acp synthase | ASC92_06285 | Not Available | Negative | 2417204 - 2418241 | 36259.6 |
| hypothetical protein | ASC92_06290 | Not Available | Negative | 2418238 - 2419365 | 41722.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
