Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ASC92_01065 | Not Available | Positive | 247215 - 249353 | 77649.3 |
| abc transporter permease | ASC92_01070 | Not Available | Negative | 249507 - 250382 | 30986.7 |
| mannosyltransferase | ASC92_01075 | Not Available | Negative | 250409 - 251221 | 29884.1 |
| nitrate abc transporter substrate-binding protein | ASC92_01080 | Not Available | Negative | 251224 - 252243 | 35867.2 |
| two-component system response regulator | ASC92_01085 | Not Available | Positive | 252425 - 253099 | 25313.9 |
| hypothetical protein | ASC92_01090 | Not Available | Positive | 253327 - 254736 | 51712.3 |
| s-adenosylmethionine synthetase | ASC92_01095 | Not Available | Negative | 254752 - 255939 | 43203.2 |
| lipid a biosynthesis acyltransferase | ASC92_01100 | Not Available | Positive | 256153 - 257043 | 32304.4 |
| lipid a biosynthesis acyltransferase | ASC92_01105 | Not Available | Positive | 257040 - 257924 | 33030.2 |
| alpha/beta hydrolase | ASC92_01110 | Not Available | Negative | 257918 - 258832 | 33683.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
