Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | ASC92_27345 | Not Available | Positive | 2286963 - 2289107 | 76181.0 |
| acetyl-coa acetyltransferase | ASC92_27350 | Not Available | Positive | 2289140 - 2290330 | 41897.5 |
| pimeloyl-coa dehydrogenase large subunit | ASC92_27355 | Not Available | Positive | 2290341 - 2291549 | 44255.0 |
| pimeloyl-coa dehydrogenase small subunit | ASC92_27360 | Not Available | Positive | 2291561 - 2292715 | 40665.5 |
| enoyl-coa hydratase | ASC92_27365 | Not Available | Positive | 2292712 - 2293524 | 28362.9 |
| coa-transferase | ASC92_27370 | Not Available | Positive | 2293598 - 2294806 | 43132.9 |
| acyl-coa synthetase | ASC92_27375 | Not Available | Positive | 2294900 - 2296882 | 69444.3 |
| abc transporter substrate-binding protein | ASC92_27380 | Not Available | Positive | 2296915 - 2297910 | 35495.4 |
| electron transfer flavoprotein subunit beta | ASC92_27390 | Not Available | Positive | 2298784 - 2299794 | 33633.9 |
| nitronate monooxygenase | ASC92_27395 | Not Available | Positive | 2299810 - 2300781 | 34685.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
