Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_27295 | Not Available | Negative | 2279159 - 2279929 | 27842.5 |
| hypothetical protein | ASC92_27300 | Not Available | Negative | 2279926 - 2280753 | 28979.9 |
| dihydroorotase | ASC92_27305 | Not Available | Negative | 2280914 - 2281945 | 37927.4 |
| rna polymerase subunit sigma-24 | ASC92_27310 | Not Available | Negative | 2281942 - 2282484 | 19775.8 |
| hypothetical protein | ASC92_27315 | Not Available | Negative | 2282488 - 2282703 | 7332.4 |
| competence protein tfox | ASC92_27320 | Not Available | Positive | 2282879 - 2283235 | 13124.9 |
| (2fe-2s)-binding protein | ASC92_27325 | Not Available | Positive | 2283379 - 2283720 | 11786.0 |
| phosphatidylethanolamine-binding protein | ASC92_27330 | Not Available | Positive | 2283748 - 2284323 | 19164.9 |
| histidine kinase | ASC92_27335 | Not Available | Positive | 2284465 - 2285898 | 54104.6 |
| lysr family transcriptional regulator | ASC92_27340 | Not Available | Negative | 2285906 - 2286820 | 34211.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
