Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| secretion protein hlyd | ASC92_27245 | Not Available | Negative | 2266948 - 2267886 | 33515.0 |
| hypothetical protein | ASC92_27250 | Not Available | Negative | 2267900 - 2268106 | 7764.81 |
| fusaric acid resistance protein | ASC92_27255 | Not Available | Negative | 2268103 - 2270214 | 75203.3 |
| marr family transcriptional regulator | ASC92_27260 | Not Available | Negative | 2270218 - 2270661 | 15855.3 |
| cysteine synthase | ASC92_27265 | Not Available | Positive | 2271281 - 2272201 | 32054.0 |
| fad-dependent oxidoreductase | ASC92_27270 | Not Available | Positive | 2272353 - 2273990 | 58532.4 |
| asp/glu/hydantoin racemase | ASC92_27275 | Not Available | Positive | 2274024 - 2274647 | 22645.9 |
| fertility inhibition fino | ASC92_27280 | Not Available | Positive | 2274698 - 2275660 | 34885.1 |
| heat-shock protein htpx | ASC92_27285 | Not Available | Negative | 2275757 - 2276629 | 30809.1 |
| hypothetical protein | ASC92_27290 | Not Available | Negative | 2276827 - 2279076 | 80835.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
