Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| omega amino acid--pyruvate aminotransferase | ASC92_27040 | Not Available | Positive | 2217375 - 2218709 | 48548.5 |
| hypothetical protein | ASC92_27045 | Not Available | Negative | 2218987 - 2219838 | 30293.5 |
| hypothetical protein | ASC92_27050 | Not Available | Negative | 2219974 - 2220252 | 10449.1 |
| hypothetical protein | ASC92_27055 | Not Available | Negative | 2220391 - 2221575 | 40787.6 |
| fumarylacetoacetate hydrolase | ASC92_27060 | Not Available | Positive | 2221728 - 2222831 | 39874.3 |
| luxr family transcriptional regulator | ASC92_27065 | Not Available | Negative | 2222841 - 2223620 | 28364.1 |
| fad-dependent oxidoreductase | ASC92_27070 | Not Available | Positive | 2223686 - 2225434 | 63101.0 |
| hypothetical protein | ASC92_27075 | Not Available | Positive | 2225431 - 2225667 | 8384.86 |
| abc transporter substrate-binding protein | ASC92_27080 | Not Available | Positive | 2225671 - 2226645 | 34325.7 |
| hypothetical protein | ASC92_27085 | Not Available | Negative | 2226734 - 2227897 | 42609.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
