Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 16s rrna methyltransferase | ASC92_26885 | Not Available | Negative | 2182036 - 2182995 | 33059.2 |
| hypothetical protein | ASC92_26890 | Not Available | Positive | 2183046 - 2183423 | 13697.4 |
| phosphoheptose isomerase | ASC92_26895 | Not Available | Positive | 2183508 - 2184152 | 21832.8 |
| transporter | ASC92_26900 | Not Available | Positive | 2184164 - 2184955 | 27293.5 |
| oxidoreductase | ASC92_26905 | Not Available | Negative | 2185101 - 2186009 | 31471.8 |
| type iv pili twitching motility protein pilt | ASC92_26910 | Not Available | Negative | 2186171 - 2187307 | 41879.4 |
| type iv pili twitching motility protein pilt | ASC92_26915 | Not Available | Negative | 2187442 - 2188485 | 38137.1 |
| yggs family pyridoxal phosphate enzyme | ASC92_26920 | Not Available | Positive | 2188537 - 2189241 | 24969.0 |
| arsr family transcriptional regulator | ASC92_26925 | Not Available | Negative | 2189254 - 2189721 | 17556.5 |
| glutamate dehydrogenase | ASC92_26930 | Not Available | Positive | 2190030 - 2191304 | 45951.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
