Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_26835 | Not Available | Positive | 2157862 - 2158536 | 24623.2 |
| hypothetical protein | ASC92_26840 | Not Available | Positive | 2158949 - 2159542 | 19916.1 |
| hypothetical protein | ASC92_26845 | Not Available | Positive | 2159672 - 2162587 | 96099.7 |
| hypothetical protein | ASC92_26850 | Not Available | Positive | 2162777 - 2170006 | 249971.0 |
| hypothetical protein | ASC92_26855 | Not Available | Positive | 2169987 - 2176895 | 227360.0 |
| glutathione s-transferase | ASC92_26860 | Not Available | Positive | 2176980 - 2177708 | 26814.7 |
| citrate synthase | ASC92_26865 | Not Available | Negative | 2177739 - 2178521 | 27450.3 |
| long-chain fatty acid--coa ligase | ASC92_26870 | Not Available | Negative | 2178539 - 2180053 | 54360.7 |
| mfs transporter | ASC92_26875 | Not Available | Negative | 2180091 - 2181080 | 34777.9 |
| iclr family transcriptional regulator | ASC92_26880 | Not Available | Positive | 2181181 - 2182020 | 29396.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
