Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| citrate synthase | ASC92_26730 | Not Available | Negative | 2134615 - 2135796 | 41535.8 |
| dihydrofolate reductase | ASC92_26735 | Not Available | Positive | 2135913 - 2136866 | 33492.5 |
| abc transporter substrate-binding protein | ASC92_26740 | Not Available | Positive | 2136910 - 2137884 | 33970.1 |
| lysr family transcriptional regulator | ASC92_26745 | Not Available | Negative | 2137981 - 2138916 | 34064.6 |
| abc transporter substrate-binding protein | ASC92_26750 | Not Available | Positive | 2139027 - 2139989 | 33290.3 |
| 4-hydroxythreonine-4-phosphate dehydrogenase | ASC92_26755 | Not Available | Positive | 2139991 - 2141040 | 37043.4 |
| l-rhamnonate dehydratase | ASC92_26760 | Not Available | Positive | 2141067 - 2142239 | 44204.1 |
| galactonate dehydratase | ASC92_26765 | Not Available | Positive | 2142250 - 2143797 | 54689.2 |
| cytochrome c biogenesis protein ccda | ASC92_26770 | Not Available | Positive | 2143822 - 2144751 | 34026.1 |
| hypothetical protein | ASC92_26780 | Not Available | Positive | 2145652 - 2145877 | 7919.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
