Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine abc transporter atp-binding protein | ASC92_00915 | Not Available | Positive | 214069 - 215139 | 38255.4 |
| abc transporter atp-binding protein | ASC92_00920 | Not Available | Positive | 215136 - 216143 | 36966.9 |
| extradiol dioxygenase | ASC92_00925 | Not Available | Positive | 216221 - 217141 | 32782.8 |
| glucose-6-phosphate dehydrogenase | ASC92_00930 | Not Available | Negative | 217164 - 218636 | 54897.4 |
| iron abc transporter substrate-binding protein | ASC92_00935 | Not Available | Positive | 218792 - 219802 | 36386.6 |
| iron abc transporter permease | ASC92_00940 | Not Available | Positive | 219815 - 222079 | 79996.1 |
| sugar abc transporter substrate-binding protein | ASC92_00945 | Not Available | Positive | 222076 - 223116 | 36990.7 |
| haloacid dehalogenase | ASC92_00950 | Not Available | Positive | 223129 - 223791 | 24434.4 |
| lipocalin | ASC92_00955 | Not Available | Negative | 223737 - 224408 | 24190.9 |
| transaldolase | ASC92_00960 | Not Available | Positive | 224638 - 225594 | 34524.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
