Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peroxiredoxin | ASC92_26230 | Not Available | Positive | 2007519 - 2008025 | 17560.9 |
| gcn5 family acetyltransferase | ASC92_26235 | Not Available | Negative | 2008028 - 2008615 | 21081.1 |
| cytochrome b | ASC92_26240 | Not Available | Negative | 2008612 - 2009322 | 25507.3 |
| cytochrome c | ASC92_26245 | Not Available | Positive | 2009481 - 2009927 | 15709.9 |
| redoxin | ASC92_26250 | Not Available | Negative | 2009993 - 2010490 | 17660.4 |
| hypothetical protein | ASC92_26255 | Not Available | Positive | 2010582 - 2011124 | 18827.5 |
| pts fructose transporter subunit iia | ASC92_26260 | Not Available | Positive | 2011257 - 2011712 | 16303.8 |
| phosphocarrier protein hpr | ASC92_26265 | Not Available | Positive | 2011681 - 2011950 | 9565.68 |
| phosphoenolpyruvate-protein phosphotransferase | ASC92_26270 | Not Available | Positive | 2012096 - 2013898 | 65785.4 |
| hypothetical protein | ASC92_26275 | Not Available | Positive | 2014032 - 2014418 | 13047.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
