Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter permease | ASC92_26125 | Not Available | Positive | 1991459 - 1992217 | 27890.9 |
| amino acid abc transporter atp-binding protein | ASC92_26130 | Not Available | Positive | 1992271 - 1993005 | 26782.7 |
| abc transporter | ASC92_26135 | Not Available | Positive | 1993049 - 1993891 | 30388.1 |
| lps biosynthesis protein | ASC92_26140 | Not Available | Negative | 1994131 - 1996515 | 88555.4 |
| two-component system response regulator | ASC92_26145 | Not Available | Negative | 1996547 - 1997236 | 25590.0 |
| hypothetical protein | ASC92_26150 | Not Available | Negative | 1997241 - 1997999 | 27882.7 |
| hypothetical protein | ASC92_26155 | Not Available | Negative | 1998018 - 1999058 | 36653.8 |
| 30s ribosomal protein s10 | ASC92_26165 | Not Available | Positive | 1999594 - 1999908 | 11834.6 |
| hypothetical protein | ASC92_26170 | Not Available | Positive | 2000060 - 2001640 | 54232.3 |
| hypothetical protein | ASC92_26175 | Not Available | Positive | 2001658 - 2002212 | 18735.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
