Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| polysaccharide deacetylase | ASC92_26025 | Not Available | Positive | 1974254 - 1974472 | 8120.78 |
| universal stress protein uspa | ASC92_26030 | Not Available | Negative | 1974499 - 1974945 | 15833.4 |
| marr family transcriptional regulator | ASC92_26035 | Not Available | Negative | 1975026 - 1975574 | 20399.6 |
| abc transporter substrate-binding protein | ASC92_26040 | Not Available | Positive | 1975770 - 1976756 | 34807.3 |
| mandelate racemase | ASC92_26045 | Not Available | Negative | 1976872 - 1978038 | 42617.1 |
| 3-oxoacyl-acp reductase | ASC92_26050 | Not Available | Negative | 1978073 - 1978786 | 23945.8 |
| twin-arginine translocation pathway signal | ASC92_26055 | Not Available | Negative | 1978776 - 1979744 | 34063.3 |
| dihydrodipicolinate synthetase | ASC92_26060 | Not Available | Negative | 1979794 - 1980732 | 33654.6 |
| lysr family transcriptional regulator | ASC92_26065 | Not Available | Positive | 1980845 - 1981771 | 33206.7 |
| dimethylmenaquinone methyltransferase | ASC92_26070 | Not Available | Negative | 1981782 - 1982453 | 23878.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
