Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_25975 | Not Available | Positive | 1965059 - 1965454 | 14454.2 |
| amino acid dehydrogenase | ASC92_25980 | Not Available | Negative | 1965507 - 1966763 | 45661.7 |
| saccharopine dehydrogenase | ASC92_25985 | Not Available | Negative | 1966827 - 1967969 | 41287.6 |
| abc transporter substrate-binding protein | ASC92_25990 | Not Available | Positive | 1968301 - 1969134 | 29840.4 |
| abc transporter permease | ASC92_25995 | Not Available | Positive | 1969265 - 1969948 | 24880.3 |
| atp-binding protein | ASC92_26000 | Not Available | Positive | 1969950 - 1970750 | 28457.8 |
| lysr family transcriptional regulator | ASC92_26005 | Not Available | Negative | 1970766 - 1971716 | 34907.1 |
| asnc family transcriptional regulator | ASC92_26010 | Not Available | Positive | 1971925 - 1972377 | 16666.3 |
| hypothetical protein | ASC92_26015 | Not Available | Positive | 1972390 - 1973073 | 24466.6 |
| hypothetical protein | ASC92_26020 | Not Available | Positive | 1973271 - 1974257 | 36733.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
