Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron abc transporter permease | ASC92_25875 | Not Available | Positive | 1943953 - 1946193 | 78971.6 |
| sugar abc transporter substrate-binding protein | ASC92_25880 | Not Available | Positive | 1946221 - 1947270 | 37194.2 |
| hypothetical protein | ASC92_25885 | Not Available | Positive | 1947304 - 1948263 | 35913.3 |
| abc transporter substrate-binding protein | ASC92_25890 | Not Available | Negative | 1948343 - 1949335 | 34645.3 |
| thiolase | ASC92_25895 | Not Available | Negative | 1949367 - 1950548 | 41171.6 |
| dna-binding protein | ASC92_25900 | Not Available | Negative | 1950545 - 1950961 | 14936.8 |
| enoyl-coa hydratase | ASC92_25905 | Not Available | Negative | 1950958 - 1951761 | 28291.9 |
| long-chain fatty acid--coa ligase | ASC92_25910 | Not Available | Negative | 1951758 - 1953452 | 61275.8 |
| acyl-coa dehydrogenase | ASC92_25915 | Not Available | Negative | 1953449 - 1954615 | 43012.8 |
| 3-oxoacyl-acp reductase | ASC92_25920 | Not Available | Negative | 1954612 - 1955448 | 29118.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
