Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| threonine dehydratase | ASC92_00865 | Not Available | Negative | 201961 - 203577 | 58263.7 |
| hypothetical protein | ASC92_00870 | Not Available | Positive | 203627 - 204757 | 42430.9 |
| porin | ASC92_00875 | Not Available | Negative | 204851 - 206047 | 42210.9 |
| osmotically inducible protein c | ASC92_00880 | Not Available | Positive | 206317 - 206766 | 15812.0 |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | ASC92_00885 | Not Available | Negative | 206776 - 207405 | 22308.7 |
| porin | ASC92_00890 | Not Available | Positive | 207687 - 208949 | 44158.5 |
| abc transporter permease | ASC92_00895 | Not Available | Positive | 209144 - 210124 | 35982.5 |
| amidohydrolase | ASC92_00900 | Not Available | Positive | 210129 - 211400 | 44861.8 |
| abc transporter substrate-binding protein | ASC92_00905 | Not Available | Positive | 211432 - 213018 | 58247.9 |
| abc transporter permease | ASC92_00910 | Not Available | Positive | 213138 - 214049 | 32298.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
