Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | ASC92_25775 | Not Available | Positive | 1921334 - 1922608 | 45895.3 |
| abc transporter atp-binding protein | ASC92_25780 | Not Available | Positive | 1922605 - 1923330 | 26210.0 |
| abc transporter atp-binding protein | ASC92_25785 | Not Available | Positive | 1923327 - 1924067 | 26437.0 |
| abc transporter permease | ASC92_25790 | Not Available | Positive | 1924054 - 1924917 | 29270.5 |
| abc transporter permease | ASC92_25795 | Not Available | Positive | 1924914 - 1925930 | 36362.9 |
| hypothetical protein | ASC92_25800 | Not Available | Positive | 1925998 - 1926945 | 35160.2 |
| hypothetical protein | ASC92_25805 | Not Available | Negative | 1927046 - 1928119 | 37553.7 |
| twin-arginine translocation pathway signal protein | ASC92_25810 | Not Available | Negative | 1928300 - 1929280 | 34380.4 |
| hypothetical protein | ASC92_25815 | Not Available | Negative | 1929336 - 1930838 | 53268.7 |
| gmc family oxidoreductase | ASC92_25820 | Not Available | Negative | 1930884 - 1932458 | 56416.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
