Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_25725 | Not Available | Positive | 1910348 - 1911337 | 35851.8 |
| asp/glu/hydantoin racemase | ASC92_25730 | Not Available | Negative | 1911375 - 1912028 | 24050.4 |
| branched-chain amino acid abc transporter substrate-binding protein | ASC92_25735 | Not Available | Negative | 1912106 - 1913344 | 45429.4 |
| hypothetical protein | ASC92_25740 | Not Available | Negative | 1913650 - 1914699 | 38228.4 |
| marr family transcriptional regulator | ASC92_25745 | Not Available | Positive | 1915131 - 1915661 | 19032.1 |
| hypothetical protein | ASC92_25750 | Not Available | Positive | 1916185 - 1916583 | 13927.6 |
| hypothetical protein | ASC92_25755 | Not Available | Negative | 1917722 - 1918888 | 43772.2 |
| 2,4-dihydroxyacetophenone dioxygenase | ASC92_25760 | Not Available | Positive | 1918973 - 1919500 | 20096.5 |
| butanediol dehydrogenase | ASC92_25765 | Not Available | Positive | 1919506 - 1920564 | 37031.9 |
| 2-deoxy-d-gluconate 3-dehydrogenase | ASC92_25770 | Not Available | Positive | 1920561 - 1921286 | 25212.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
