Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | ASC92_25675 | Not Available | Negative | 1901116 - 1901916 | 28087.8 |
| 3-keto-5-aminohexanoate cleavage protein | ASC92_25680 | Not Available | Negative | 1902188 - 1903123 | 33720.8 |
| hypothetical protein | ASC92_25685 | Not Available | Negative | 1903151 - 1903522 | 13418.0 |
| hypothetical protein | ASC92_25690 | Not Available | Negative | 1903634 - 1904506 | 32749.4 |
| abc transporter atp-binding protein | ASC92_25695 | Not Available | Negative | 1904617 - 1905324 | 25924.6 |
| abc transporter atp-binding protein | ASC92_25700 | Not Available | Negative | 1905311 - 1906054 | 26971.8 |
| branched-chain amino acid abc transporter permease | ASC92_25705 | Not Available | Negative | 1906051 - 1907052 | 35114.0 |
| branched-chain amino acid abc transporter permease | ASC92_25710 | Not Available | Negative | 1907049 - 1907921 | 30625.6 |
| abc transporter | ASC92_25715 | Not Available | Negative | 1907938 - 1909128 | 43168.8 |
| glucose 1-dehydrogenase | ASC92_25720 | Not Available | Positive | 1909400 - 1910131 | 26313.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
