Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor greb | ASC92_25515 | Not Available | Positive | 1871160 - 1871735 | 21107.7 |
| guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | ASC92_25520 | Not Available | Negative | 1871742 - 1873997 | 83241.8 |
| dna-directed rna polymerase subunit omega | ASC92_25525 | Not Available | Negative | 1874091 - 1874294 | 7388.26 |
| guanylate kinase | ASC92_25530 | Not Available | Negative | 1874334 - 1874954 | 23075.5 |
| hypothetical protein | ASC92_25535 | Not Available | Negative | 1874969 - 1875892 | 33509.3 |
| serine/threonine protein kinase | ASC92_25540 | Not Available | Positive | 1875984 - 1876991 | 37704.8 |
| serine/threonine protein phosphatase | ASC92_25545 | Not Available | Positive | 1876996 - 1877907 | 33057.3 |
| ribonuclease ph | ASC92_25550 | Not Available | Positive | 1877950 - 1878681 | 25659.8 |
| non-canonical purine ntp pyrophosphatase | ASC92_25555 | Not Available | Positive | 1878685 - 1879284 | 20834.0 |
| coproporphyrinogen iii oxidase | ASC92_25560 | Not Available | Positive | 1879284 - 1880546 | 46782.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
