Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_25465 | Not Available | Positive | 1864517 - 1865059 | 19380.9 |
| nadph-dependent fmn reductase | ASC92_25470 | Not Available | Negative | 1865034 - 1865513 | 16585.0 |
| gntr family transcriptional regulator | ASC92_25475 | Not Available | Positive | 1865668 - 1866393 | 27189.4 |
| 5-carboxymethyl-2-hydroxymuconate isomerase | ASC92_25480 | Not Available | Positive | 1866699 - 1867559 | 31283.4 |
| mfs transporter | ASC92_25485 | Not Available | Positive | 1867626 - 1868597 | 33235.2 |
| hypothetical protein | ASC92_25490 | Not Available | Positive | 1868629 - 1869207 | 20746.1 |
| alcohol dehydrogenase | ASC92_25495 | Not Available | Positive | 1869210 - 1870214 | 34788.4 |
| glyoxalase | ASC92_25500 | Not Available | Positive | 1870225 - 1870803 | 21460.4 |
| Trna-arg | Not Available | Not Available | Positive | 1870834 - 1870910 | Not Available |
| Trna-arg | Not Available | Not Available | Positive | 1871026 - 1871102 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
