Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| disulfide bond formation protein dsba | ASC92_25255 | Not Available | Positive | 1821058 - 1821651 | 21457.8 |
| enoyl-coa hydratase | ASC92_25260 | Not Available | Positive | 1821689 - 1822453 | 27030.9 |
| acyl-coa thioesterase | ASC92_25265 | Not Available | Negative | 1822509 - 1822928 | 15108.2 |
| metal abc transporter permease | ASC92_25270 | Not Available | Positive | 1822970 - 1824853 | 68998.8 |
| hydroxyacid dehydrogenase | ASC92_25275 | Not Available | Positive | 1824898 - 1825836 | 33176.1 |
| lysr family transcriptional regulator | ASC92_25285 | Not Available | Positive | 1827450 - 1828439 | 36239.5 |
| aspartate ammonia-lyase | ASC92_25290 | Not Available | Positive | 1828612 - 1830066 | 51850.5 |
| abc transporter substrate-binding protein | ASC92_25295 | Not Available | Positive | 1830235 - 1831134 | 32178.4 |
| glutamate abc transporter permease | ASC92_25300 | Not Available | Positive | 1831233 - 1831964 | 26810.2 |
| amino acid abc transporter permease | ASC92_25305 | Not Available | Positive | 1831966 - 1832655 | 25587.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
