Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | ASC92_25205 | Not Available | Negative | 1809896 - 1810783 | 32410.2 |
| oxidoreductase | ASC92_25210 | Not Available | Positive | 1810892 - 1811650 | 26339.6 |
| tetr family transcriptional regulator | ASC92_25215 | Not Available | Positive | 1811787 - 1812473 | 24532.5 |
| acyl-coa dehydrogenase | ASC92_25220 | Not Available | Positive | 1812548 - 1814344 | 64927.3 |
| hypothetical protein | ASC92_25225 | Not Available | Positive | 1814386 - 1814832 | 16003.2 |
| 3-hydroxyacyl-coa dehydrogenase | ASC92_25230 | Not Available | Positive | 1814873 - 1817272 | 85560.3 |
| hypothetical protein | ASC92_25235 | Not Available | Positive | 1817326 - 1817739 | 15904.7 |
| acetyl-coa acetyltransferase | ASC92_25240 | Not Available | Positive | 1817769 - 1818965 | 41727.4 |
| alpha/beta hydrolase | ASC92_25245 | Not Available | Positive | 1819022 - 1819921 | 33148.0 |
| acyl-coa thioesterase | ASC92_25250 | Not Available | Positive | 1819951 - 1820787 | 30038.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
