Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ASC92_25155 | Not Available | Positive | 1800499 - 1801101 | 21302.2 |
| hypothetical protein | ASC92_25160 | Not Available | Positive | 1801228 - 1802043 | 29528.9 |
| hypothetical protein | ASC92_25165 | Not Available | Positive | 1802036 - 1802923 | 29985.1 |
| dehydrogenase | ASC92_25170 | Not Available | Negative | 1802938 - 1803996 | 36885.1 |
| gluconolactonase | ASC92_25175 | Not Available | Negative | 1804000 - 1804932 | 33923.9 |
| galactonate dehydratase | ASC92_25180 | Not Available | Negative | 1804953 - 1806479 | 53819.0 |
| gntr family transcriptional regulator | ASC92_25185 | Not Available | Negative | 1806510 - 1807226 | 26620.8 |
| nad(p)-dependent oxidoreductase | ASC92_25190 | Not Available | Positive | 1807359 - 1808093 | 25359.9 |
| 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase | ASC92_25195 | Not Available | Positive | 1808182 - 1809030 | 30689.4 |
| arac family transcriptional regulator | ASC92_25200 | Not Available | Positive | 1809056 - 1809892 | 30243.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
