Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucose-1-phosphate thymidylyltransferase | ASC92_25055 | Not Available | Positive | 1774911 - 1775807 | 32650.1 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | ASC92_25060 | Not Available | Positive | 1775804 - 1776352 | 20076.9 |
| hypothetical protein | ASC92_25065 | Not Available | Negative | 1776603 - 1777349 | 28164.3 |
| hypothetical protein | ASC92_25070 | Not Available | Negative | 1777470 - 1777679 | 7604.42 |
| hypothetical protein | ASC92_25075 | Not Available | Positive | 1777878 - 1779299 | 51958.6 |
| hypothetical protein | ASC92_25080 | Not Available | Positive | 1779334 - 1781262 | 70299.5 |
| hypothetical protein | ASC92_25085 | Not Available | Positive | 1781259 - 1782146 | 32939.0 |
| hypothetical protein | ASC92_25090 | Not Available | Positive | 1785249 - 1785464 | 7996.81 |
| gdp-mannose 4,6 dehydratase | ASC92_25095 | Not Available | Negative | 1787522 - 1788406 | 32362.1 |
| gdp-mannose 4,6 dehydratase | ASC92_25100 | Not Available | Negative | 1788403 - 1789443 | 39104.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
