Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| marr family transcriptional regulator | ASC92_24950 | Not Available | Positive | 1754074 - 1754499 | 16157.7 |
| chloride channel protein | ASC92_24955 | Not Available | Positive | 1754496 - 1756262 | 62143.2 |
| nadph:quinone reductase | ASC92_24960 | Not Available | Negative | 1756264 - 1757274 | 35568.1 |
| lysr family transcriptional regulator | ASC92_24965 | Not Available | Positive | 1757361 - 1758266 | 33308.0 |
| 3-oxoacyl-acp reductase | ASC92_24970 | Not Available | Negative | 1758263 - 1759060 | 27334.1 |
| creatininase | ASC92_24975 | Not Available | Positive | 1759159 - 1759995 | 29012.9 |
| hypothetical protein | ASC92_24980 | Not Available | Negative | 1760005 - 1760976 | 34104.3 |
| lysine transporter lyse | ASC92_24985 | Not Available | Negative | 1760989 - 1761621 | 22432.2 |
| hypothetical protein | ASC92_24990 | Not Available | Negative | 1761624 - 1762316 | 24390.3 |
| phenazine biosynthesis protein phzf | ASC92_24995 | Not Available | Negative | 1762343 - 1763275 | 32678.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
