Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | ASC92_00765 | Not Available | Negative | 180550 - 182340 | 66552.0 |
| mfs transporter | ASC92_00770 | Not Available | Positive | 182551 - 183816 | 43938.1 |
| gntr family transcriptional regulator | ASC92_00775 | Not Available | Negative | 183764 - 185182 | 51142.8 |
| hypothetical protein | ASC92_00780 | Not Available | Positive | 185282 - 185470 | 6501.36 |
| cytochrome c | ASC92_00785 | Not Available | Positive | 185467 - 186183 | 25320.7 |
| alcohol dehydrogenase | ASC92_00790 | Not Available | Positive | 186197 - 187480 | 45390.0 |
| lipoxygenase | ASC92_00795 | Not Available | Negative | 187497 - 189506 | 71686.1 |
| 5'-nucleotidase | ASC92_00800 | Not Available | Negative | 189698 - 190597 | 33145.8 |
| type ii secretion system protein gspf | ASC92_00805 | Not Available | Negative | 190623 - 191861 | 43672.9 |
| type ii secretion system protein gspe | ASC92_00810 | Not Available | Negative | 191876 - 193267 | 50064.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
