Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | ASC92_24595 | Not Available | Positive | 1678836 - 1683071 | 155023.0 |
| lema family protein | ASC92_24600 | Not Available | Positive | 1683170 - 1683778 | 21231.6 |
| 16s rrna methyltransferase | ASC92_24605 | Not Available | Positive | 1683908 - 1685242 | 48058.6 |
| hypothetical protein | ASC92_24610 | Not Available | Positive | 1685223 - 1685861 | 24063.9 |
| pas domain-containing sensor histidine kinase | ASC92_24615 | Not Available | Positive | 1685858 - 1688188 | 82947.1 |
| xre family transcriptional regulator | ASC92_24620 | Not Available | Positive | 1688278 - 1688979 | 25227.4 |
| Trna-phe | Not Available | Not Available | Positive | 1689004 - 1689079 | Not Available |
| integrase | ASC92_24635 | Not Available | Positive | 1689623 - 1691128 | 56625.4 |
| xre family transcriptional regulator | ASC92_24640 | Not Available | Negative | 1691520 - 1691825 | 11215.7 |
| xre family transcriptional regulator | ASC92_24645 | Not Available | Positive | 1692088 - 1692660 | 20743.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
