Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine acetyltransferase | ASC92_24440 | Not Available | Negative | 1646853 - 1648082 | 43048.4 |
| preprotein translocase subunit seca | ASC92_24445 | Not Available | Negative | 1648113 - 1650899 | 104757.0 |
| hypothetical protein | ASC92_24450 | Not Available | Positive | 1651080 - 1651388 | 10957.5 |
| ornithine cyclodeaminase | ASC92_24455 | Not Available | Positive | 1651447 - 1652433 | 35029.0 |
| pyridoxal-5'-phosphate-dependent protein subunit beta | ASC92_24460 | Not Available | Negative | 1652438 - 1653589 | 41432.6 |
| dna-binding protein | ASC92_24465 | Not Available | Positive | 1653684 - 1654310 | 22794.1 |
| threonine synthase | ASC92_24470 | Not Available | Negative | 1654612 - 1655856 | 43386.8 |
| hypothetical protein | ASC92_24475 | Not Available | Negative | 1655937 - 1656533 | 21007.7 |
| luxr family transcriptional regulator | ASC92_24480 | Not Available | Negative | 1656751 - 1657758 | 36705.1 |
| atpase | ASC92_24485 | Not Available | Negative | 1657779 - 1661372 | 130116.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
