Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pyrophosphohydrolase | ASC92_24340 | Not Available | Positive | 1627499 - 1628167 | 26316.0 |
| hypothetical protein | ASC92_24345 | Not Available | Positive | 1628196 - 1628708 | 18870.2 |
| gamma-glutamyl kinase | ASC92_24350 | Not Available | Negative | 1628750 - 1629889 | 40352.5 |
| gtpase obg | ASC92_24355 | Not Available | Negative | 1629984 - 1631060 | 38857.8 |
| 50s ribosomal protein l27 | ASC92_24360 | Not Available | Negative | 1631132 - 1631392 | 8903.78 |
| 50s ribosomal protein l21 | ASC92_24365 | Not Available | Negative | 1631405 - 1631716 | 11196.7 |
| octaprenyl diphosphate synthase | ASC92_24370 | Not Available | Positive | 1631908 - 1632900 | 35048.1 |
| Trna-pro | Not Available | Not Available | Positive | 1632952 - 1633028 | Not Available |
| type iv-a pilus assembly atpase pilb | ASC92_24380 | Not Available | Positive | 1633142 - 1634875 | 62634.4 |
| type ii secretion system protein f | ASC92_24385 | Not Available | Positive | 1634904 - 1636133 | 44697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
