Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel protein mscs | ASC92_24290 | Not Available | Positive | 1616452 - 1618917 | 86607.1 |
| hypothetical protein | ASC92_24295 | Not Available | Negative | 1618975 - 1619253 | 9787.34 |
| glutamyl-trna reductase | ASC92_24300 | Not Available | Positive | 1619367 - 1620638 | 45790.1 |
| peptide chain release factor 1 | ASC92_24305 | Not Available | Positive | 1620735 - 1621823 | 40512.8 |
| protein-(glutamine-n5) methyltransferase, release factor-specific | ASC92_24310 | Not Available | Positive | 1621823 - 1622674 | 29782.2 |
| glutaredoxin | ASC92_24315 | Not Available | Positive | 1622704 - 1623036 | 11920.4 |
| mannose-6-phosphate isomerase | ASC92_24320 | Not Available | Positive | 1623053 - 1623559 | 18237.3 |
| hypothetical protein | ASC92_24325 | Not Available | Positive | 1623615 - 1624925 | 48469.1 |
| lytic transglycosylase | ASC92_24330 | Not Available | Negative | 1624932 - 1625609 | 25008.1 |
| proline--trna ligase | ASC92_24335 | Not Available | Negative | 1625606 - 1627351 | 63952.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
