Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. Root411 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1013851 bp
Thymine Count
1009264 bp
Guanine Count
2025251 bp
Cytosine Count
2015464 bp
Genome Length
6064537 bp
Protein-coding Genes
5397 genes
Non-Coding Genes
61 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ubiquinone biosynthesis methyltransferase ubie | ASC92_24240 | Not Available | Negative | 1603949 - 1604680 | 26717.3 |
| hypothetical protein | ASC92_24245 | Not Available | Negative | 1604815 - 1605228 | 14830.4 |
| hypothetical protein | ASC92_24250 | Not Available | Negative | 1605228 - 1605665 | 15993.3 |
| fad-linked oxidase | ASC92_24255 | Not Available | Negative | 1605662 - 1609540 | 142766.0 |
| d-3-phosphoglycerate dehydrogenase | ASC92_24260 | Not Available | Negative | 1609727 - 1610959 | 43889.1 |
| glycerol-3-phosphate abc transporter substrate-binding protein | ASC92_24265 | Not Available | Positive | 1611188 - 1612498 | 47694.6 |
| glycerol-3-phosphate transporter permease | ASC92_24270 | Not Available | Positive | 1612608 - 1613489 | 32421.0 |
| glycerol-3-phosphate transporter | ASC92_24275 | Not Available | Positive | 1613532 - 1614383 | 31268.1 |
| glycerol-3-phosphate transporter atp-binding subunit | ASC92_24280 | Not Available | Positive | 1614524 - 1615531 | 36916.9 |
| glycerophosphodiester phosphodiesterase | ASC92_24285 | Not Available | Positive | 1615656 - 1616399 | 26518.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
